Crystal structure of phosphotransacetylase from the methanogenic archaeon Methanosarcina thermophila.
Journal
  Structure (Cambridge, Mass. : 2001)
Citation
  Structure (Camb). 12(4):559-67
Publication date
  2004 Apr
Authors
  Iyer PP
Lawrence SH
Luther KB
Rajashankar KR
Yennawar HP
Ferry JG
Schindelin H
Investigators
  Gregory Ferry
Grant agencies
  National Institute of Diabetes and Digestive and Kidney Diseases
National Institute of General Medical Sciences
Grants
  NIDDK DK54835
NIGMS GM44661
MeSH headings
  Archaeal Proteins
Methanosarcina
Phosphate Acetyltransferase
MeSH qualifiers
  chemistry
enzymology
Abstract
  Phosphotransacetylase (Pta) [EC 2.3.1.8] is ubiquitous in the carbon assimilation and energy-yielding pathways in anaerobic prokaryotes where it catalyzes the reversible transfer of the acetyl group from acetyl phosphate to CoA forming acetyl CoA and inorganic phosphate. The crystal structure of Pta from the methane-producing archaeon Methanosarcina thermophila, representing the first crystal structure of any Pta, was determined by multiwavelength anomalous diffraction at 2.7 A resolution. In solution and in the crystal, the enzyme forms a homodimer. Each monomer consists of two alpha/beta domains with a cleft along the domain boundary, which presumably contains the substrate binding sites. Comparison of the four monomers present in the asymmetric unit indicates substantial variations in the relative orientation of the two domains and the structure of the putative active site cleft. A search for structural homologs revealed the NADP(+)-dependent isocitrate and isopropylmalate dehydrogenases as the only homologs with a similar two-domain architecture.