SLC24A5, a putative cation exchanger, affects pigmentation in zebrafish and humans.
Journal
  Science.
Citation
  Science. 310(5755):1782-6
Publication date
  2005 Dec 16
Authors
  Lamason RL
Mohideen MA
Mest JR
Wong AC
Norton HL
Aros MC
Jurynec MJ
Mao X
Humphreville VR
Humbert JE
Sinha S
Moore JL
Jagadeeswaran P
Zhao W
Ning G
Makalowska I
McKeigue PM
O'donnell D
Kittles R
Parra EJ
Mangini NJ
Grunwald DJ
Shriver MD
Canfield VA
Cheng KC
Investigators
  Victor A. Canfield
Keith C. Cheng
Izabela Makalowska
Mark Shriver
Grant agencies
  National Cancer Institute
National Eye Institute
National Institute of Child Health and Human Development
National Human Genome Research Institute
National Heart, Lung, and Blood Institute
National Center for Research Resources
Grants
  NCI CA73935
NEI EY11308
NICHD HD37572
NICHD HD40179
NHGRI HG002154
NHLBI HL077910
NCRR RR017441
MeSH headings
  Antiporters
Skin Pigmentation
Zebrafish
Zebrafish Proteins
MeSH qualifiers
  genetics
Abstract
  Lighter variations of pigmentation in humans are associated with diminished number, size, and density of melanosomes, the pigmented organelles of melanocytes. Here we show that zebrafish golden mutants share these melanosomal changes and that golden encodes a putative cation exchanger slc24a5 (nckx5) that localizes to an intracellular membrane, likely the melanosome or its precursor. The human ortholog is highly similar in sequence and functional in zebrafish. The evolutionarily conserved ancestral allele of a human coding polymorphism predominates in African and East Asian populations. In contrast, the variant allele is nearly fixed in European populations, is associated with a substantial reduction in regional heterozygosity, and correlates with lighter skin pigmentation in admixed populations, suggesting a key role for the SLC24A5 gene in human pigmentation.